Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

eQTLHap: a tool for comprehensive eQTL analysis considering haplotypic and genotypic effects.

Briefings in bioinformatics - 2 Sept 2021

Al Bkhetan Ziad, Chana Gursharan, Soon Ong Cheng, Goudey Benjamin, Ramamohanarao Kotagiri

Abstract excerpt

MOTIVATION: The high accuracy of recent haplotype phasing tools is enabling the integration of haplotype (or phase) information more widely in genetic investigations. One such possibility is phase-aware expression quantitative trait loci (eQTL) analysis, where haplotype-based analysis has the potential to detect associations that may otherwise be missed by standard SNP-based approaches. RESULTS: We present...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Algorithms
Share to Computational Biology

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Gene Expression Regulation

Share to Genome-Wide Association Study

Share to Haplotypes

Share to Internet

Share to Linkage Disequilibrium

Share to Quantitative Trait Loci

Source

Identifiers

PMID: 33834181
DOI: 10.1093/bib/bbab093

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

eQTLHap: a tool for comprehensive eQTL analysis considering haplotypic and genotypic effects.PMID 33834181Read ↗

Haplotype-aware modeling of cis-regulatory effects highlights the gaps remaining in eQTL data.Semantic proximity Read ↗

Accounting for Non-genetic Factors Improves the Power of eQTL StudiesSemantic proximity Read ↗

Haplotype-aware modeling of cis-regulatory effects highlights the gaps remaining in eQTL dataSemantic proximity Read ↗

Enhanced methods to detect haplotypic effects on gene expression.Semantic proximity Read ↗

Haplotype-aware modeling of <i>cis</i> -regulatory effects highlights the gaps remaining in eQTL dataSemantic proximity Read ↗

Efficient and accurate mixed model association tool for single-cell eQTL analysisSemantic proximity Read ↗

A powerful approach reveals numerous expression quantitative trait haplotypes in multiple tissues.Semantic proximity Read ↗

LRphase: an efficient method for assigning haplotype identity to long readsSemantic proximity Read ↗

Combinatorial and statistical prediction of gene expression from haplotype sequence.Semantic proximity Read ↗

Rare Variant Phasing and Haplotypic Expression from RNA-Sequencing with phASERSemantic proximity Read ↗

Rare variant phasing and haplotypic expression from RNA sequencing with phASER.Semantic proximity Read ↗

Improved haplotype inference by exploiting long-range linking and allelic imbalance in RNA-seq datasets.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.