Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data.

BMC bioinformatics - 9 Mar 2021

Chen Hao, Lu Yan, Lu Dongsheng, Xu Shuhua

Abstract excerpt

BACKGROUND: Y-chromosome DNA (Y-DNA) has been used for tracing paternal lineages and offers a clear path from an individual to a known, or likely, direct paternal ancestor. The advance of next-generation sequencing (NGS) technologies increasingly improves the resolution of the non-recombining region of the Y-chromosome (NRY). However, a lack of suitable computer tools prevents the use of NGS data from the Y-DNA...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosomes, Human, Y
Share to Genetics, Population
Share to Haplotypes

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Microsatellite Repeats

Share to Polymorphism, Single Nucleotide

Source

Open in PubMed Open full text

Identifiers

PMID: 33750289
DOI: 10.1186/s12859-021-04057-z
PMCID: PMC7941695

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data.PMID 33750289Read ↗

YHP: Y-chromosome Haplogroup Predictor for predicting male lineages based on Y-STRs.Semantic proximity Read ↗

YHP: Y-chromosome Haplogroup Predictor for predicting male lineages based on Y-STRsSemantic proximity Read ↗

Development and validation of a custom panel including 256 Y-SNPs for Chinese Y-chromosomal haplogroups dissection.Semantic proximity Read ↗

Towards a consensus Y-chromosomal phylogeny and Y-SNP set in forensics in the next-generation sequencing era.Semantic proximity Read ↗

Development and validation of a 365-Plex NGS panel for integrated Y-STR and Y-SNP typing: Enhancing paternal lineage analysis in Chinese populations.Semantic proximity Read ↗

Y-SNP Haplogroup Hierarchy Finder: a web tool for Y-SNP haplogroup assignment.Semantic proximity Read ↗

Development and validation of YARN: A novel SE-400 MPS kit for East Asian paternal lineage analysis.Semantic proximity Read ↗

AMY-tree: an algorithm to use whole genome SNP calling for Y chromosomal phylogenetic applications.Semantic proximity Read ↗

CSYseq: The first Y-chromosome sequencing tool typing a large number of Y-SNPs and Y-STRs to unravel worldwide human population genetics.Semantic proximity Read ↗

UYSD: a novel data repository accessible via public website for worldwide population frequencies of Y-SNP haplogroups.Semantic proximity Read ↗

Y-mer: A k-mer based method for determining human Y chromosome haplogroups from ultra-low sequencing depth dataSemantic proximity Read ↗

Developmental validation of a 381 Y-chromosome SNP panel for haplogroup analysis in the Chinese populations.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.