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Article

PopInf: An Approach for Reproducibly Visualizing and Assigning Population Affiliation in Genomic Samples of Uncertain Origin.

Journal of computational biology : a journal of computational molecular cell biology - 1 Mar 2021

Taravella Oill Angela M, Deshpande Anagha J, Natri Heini M, Wilson Melissa A

Abstract excerpt

Germline genetic variation contributes to cancer etiology, but self-reported race is not always consistent with genetic ancestry, and samples may not have identifying ancestry information. In this study, we describe a flexible computational pipeline, PopInf, to visualize principal component analysis output and assign ancestry to samples with unknown genetic ancestry, given a reference population panel of known...

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Identifiers

PMID: 33074720
DOI: 10.1089/cmb.2019.0434
PMCID: PMC7994427

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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