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AncestryGrapher toolkit: Python command-line pipelines to visualize global- and local- ancestry inferences from the RFMIX version 2 software.

Bioinformatics (Oxford, England) - 1 Nov 2024

Lisi Alessandro, Campbell Michael C

Abstract excerpt

SUMMARY: Admixture is a fundamental process that has shaped levels and patterns of genetic variation in human populations. RFMIX version 2 (RFMIX2) utilizes a robust modeling approach to identify the genetic ancestries in admixed populations. However, this software does not have a built-in method to visually summarize the results of analyses. Here, we introduce the AncestryGrapher toolkit, which converts the...

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Software
Humans
Genome, Human
Genetics, Population
Genetic Variation

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 39412440
DOI: 10.1093/bioinformatics/btae616
PMCID: PMC11534077

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