A Spectral Rotation Method with Triplet Periodicity Property for Planted Motif Finding Problems.

Abstract excerpt

BACKGROUND: Genes are known as functional patterns in the genome and are presumed to have biological significance. They can indicate binding sites for transcription factors and they encode certain proteins. Finding genes from biological sequences is a major task in computational biology for unraveling the mechanisms of gene expression. OBJECTIVE: Planted motif finding problems are a class of mathematical models...

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