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Article

HLA Typing from Short-Read Sequencing Data with OptiType.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2018

Szolek András

Abstract excerpt

The established standards for HLA genotyping rely on targeted DNA sequencing techniques. However, the increasing abundance of short-read sequencing data has prompted a demand for computational tools capable of HLA typing from general purpose sequencing data as well. OptiType is a software that performs HLA typing from short-read DNA and RNA sequencing data, and this chapter guides the user through its...

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PMID: 29858812
DOI: 10.1007/978-1-4939-8546-3_15

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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