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Article

ChannelsDB: database of biomacromolecular tunnels and pores.

Nucleic acids research - 4 Jan 2018

Pravda Lukáš, Sehnal David, Svobodová Vareková Radka, Navrátilová Veronika, Toušek Dominik, Berka Karel, Otyepka Michal, Koca Jaroslav

Abstract excerpt

ChannelsDB (http://ncbr.muni.cz/ChannelsDB) is a database providing information about the positions, geometry and physicochemical properties of channels (pores and tunnels) found within biomacromolecular structures deposited in the Protein Data Bank. Channels were deposited from two sources; from literature using manual deposition and from a software tool automatically detecting tunnels leading to the enzymatic...

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Identifiers

PMID: 29036719
DOI: 10.1093/nar/gkx868
PMCID: PMC5753359

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

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