fastNGSadmix: admixture proportions and principal component analysis of a single NGS sample.

Abstract excerpt

MOTIVATION: Estimation of admixture proportions and principal component analysis (PCA) are fundamental tools in populations genetics. However, applying these methods to low- or mid-depth sequencing data without taking genotype uncertainty into account can introduce biases. RESULTS: Here we present fastNGSadmix, a tool to fast and reliably estimate admixture proportions and perform PCA from next generation...

Topics

Share this publication in a Topic to start or enrich a Post.

• Share to Genetics, Population
• Share to Genotype
• Share to High-Throughput Nucleotide Sequencing