Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Liquid-phase sequence capture and targeted re-sequencing revealed novel polymorphisms in tomato genes belonging to the MEP carotenoid pathway.

Scientific reports - 17 Jul 2017

Terracciano Irma, Cantarella Concita, Fasano Carlo, Cardi Teodoro, Mennella Giuseppe, D'Agostino Nunzio

Abstract excerpt

Tomato (Solanum lycopersicum L.) plants are characterized by having a variety of fruit colours that reflect the composition and accumulation of diverse carotenoids in the berries. Carotenoids are extensively studied for their health-promoting effects and this explains the great attention these pigments received by breeders and researchers worldwide. In this work we applied Agilent's SureSelect liquid-phase...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Carotenoids
Share to Exons

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to INDEL Mutation

Share to Metabolic Networks and Pathways

Share to Plant Proteins

Share to Regulatory Elements, Transcriptional

Share to Sequence Analysis, DNA

Share to Solanum lycopersicum

Source

Open in PubMed Open full text

Identifiers

PMID: 28717173
DOI: 10.1038/s41598-017-06120-3
PMCID: PMC5514110

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Liquid-phase sequence capture and targeted re-sequencing revealed novel polymorphisms in tomato genes belonging to the MEP carotenoid pathway.PMID 28717173Read ↗

Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding.Semantic proximity Read ↗

Genome-wide association studies using single nucleotide polymorphism markers developed by re-sequencing of the genomes of cultivated tomato.Semantic proximity Read ↗

Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals that the ethylene response factor SlERF6 plays an important role in ripening and carotenoid accumulation.Semantic proximity Read ↗

Whole-Genome Profiling of Ethyl Methanesulfonate Mutagenesis in TomatoSemantic proximity Read ↗

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.Semantic proximity Read ↗

Reanalysis of genome sequences of tomato accessions and its wild relatives: development of Tomato Genomic Variation (TGV) database integrating SNPs and INDELs polymorphisms.Semantic proximity Read ↗

Next-generation sequencing (NGS)-based identification of induced mutations in a doubly mutagenized tomato (Solanum lycopersicum) population.Semantic proximity Read ↗

Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato.Semantic proximity Read ↗

Functional genomics of tomato: opportunities and challenges in post-genome NGS era.Semantic proximity Read ↗

Sequencing-Based Bin Map Construction of a Tomato Mapping Population, Facilitating High-Resolution Quantitative Trait Loci Detection.Semantic proximity Read ↗

Identification and assessment of alleles in the promoter of the Cyc-B gene that modulate levels of β-carotene in ripe tomato fruit.Semantic proximity Read ↗

GWAS Based on RNA-Seq SNPs and High-Throughput Phenotyping Combined with Climatic Data Highlights the Reservoir of Valuable Genetic Diversity in Regional Tomato Landraces.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.