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Sequencing-Based Bin Map Construction of a Tomato Mapping Population, Facilitating High-Resolution Quantitative Trait Loci Detection.

The plant genome - 1 Mar 2019

Gonda Itay, Ashrafi Hamid, Lyon David A, Strickler Susan R, Hulse-Kemp Amanda M, Ma Qiyue, Sun Honghe, Stoffel Kevin, Powell Adrian F, Futrell Stephanie, Thannhauser Theodore W, Fei Zhangjun, Van Deynze Allen E, Mueller Lukas A, Giovannoni James J, Foolad Majid R

Abstract excerpt

Genotyping-by-sequencing (GBS) was employed to construct a highly saturated genetic linkage map of a tomato ( L.) recombinant inbred line (RIL) population, derived from a cross between cultivar NC EBR-1 and the wild tomato L. accession LA2093. A pipeline was developed to convert single nucleotide polymorphism (SNP) data into genomic bins, which could be used for fine mapping of quantitative trait loci (QTL) and...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 30951101
DOI: 10.3835/plantgenome2018.02.0010
PMCID: PMC12809921

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