Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

TraitRateProp: a web server for the detection of trait-dependent evolutionary rate shifts in sequence sites.

Nucleic acids research - 3 Jul 2017

Levy Karin Eli, Ashkenazy Haim, Wicke Susann, Pupko Tal, Mayrose Itay

Abstract excerpt

Understanding species adaptation at the molecular level has been a central goal of evolutionary biology and genomics research. This important task becomes increasingly relevant with the constant rise in both genotypic and phenotypic data availabilities. The TraitRateProp web server offers a unique perspective into this task by allowing the detection of associations between sequence evolution rate and...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Algorithms
Share to Evolution, Molecular
Share to Internet

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Orchidaceae

Share to Phylogeny

Share to Ribosomal Proteins

Share to Sequence Analysis

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 28453644
DOI: 10.1093/nar/gkx288
PMCID: PMC5570260

Genes

RPS8

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

TraitRateProp: a web server for the detection of trait-dependent evolutionary rate shifts in sequence sites.PMID 28453644Read ↗

An Integrated Model of Phenotypic Trait Changes and Site-Specific Sequence Evolution.Semantic proximity Read ↗

From Trees to Traits: A Review of Advances in PhyloG2P Methods and Future Directions.Semantic proximity Read ↗

RERconverge Expansion: Using Relative Evolutionary Rates to Study Complex Categorical Trait Evolution.Semantic proximity Read ↗

MoleRate: comparing molecular relative evolutionary rates to detect convergent evolution.Semantic proximity Read ↗

A codon model for associating phenotypic traits with altered selective patterns of sequence evolutionSemantic proximity Read ↗

Detecting macroevolutionary genotype-phenotype associations using error-corrected rates of protein convergence.Semantic proximity Read ↗

A Phenotype-Genotype Codon Model for Detecting Adaptive Evolution.Semantic proximity Read ↗

RERconverge Expansion: Using Relative Evolutionary Rates to Study Complex Categorical Trait EvolutionSemantic proximity Read ↗

A Codon Model for Associating Phenotypic Traits with Altered Selective Patterns of Sequence Evolution.Semantic proximity Read ↗

The adaptive evolution database (TAED).Semantic proximity Read ↗

DIVERGE: phylogeny-based analysis for functional-structural divergence of a protein family.Semantic proximity Read ↗

Proteome-Scale Detection of Differential Conservation Patterns at Protein and Subprotein Levels with BLUR.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.