Article
Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holstein-Friesian cattle.
Genetics, selection, evolution : GSE - 1 Dec 2016
Veerkamp Roel F, Bouwman Aniek C, Schrooten Chris, Calus Mario P L
Abstract excerpt
BACKGROUND: Whole-genome sequence data is expected to capture genetic variation more completely than common genotyping panels. Our objective was to compare the proportion of variance explained and the accuracy of genomic prediction by using imputed sequence data or preselected SNPs from a genome-wide association study (GWAS) with imputed whole-genome sequence data. METHODS: Phenotypes were available for 5503...
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