Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Impact of SNPs on Protein Phosphorylation Status in Rice (Oryza sativa L.).

International journal of molecular sciences - 11 Nov 2016

Lin Shoukai, Chen Lijuan, Tao Huan, Huang Jian, Xu Chaoqun, Li Lin, Ma Shiwei, Tian Tian, Liu Wei, Xue Lichun, Ai Yufang, He Huaqin

Abstract excerpt

Single nucleotide polymorphisms (SNPs) are widely used in functional genomics and genetics research work. The high-quality sequence of rice genome has provided a genome-wide SNP and proteome resource. However, the impact of SNPs on protein phosphorylation status in rice is not fully understood. In this paper, we firstly updated rice SNP resource based on the new rice genome Ver. 7.0, then systematically analyzed...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosomes, Plant
Share to Genes, Plant

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genetic Loci

Share to Heterotrimeric GTP-Binding Proteins

Share to Plant Breeding

Share to Plant Proteins

Share to Protein Processing, Post-Translational

Source

Open in PubMed Open full text

Identifiers

PMID: 27845739
DOI: 10.3390/ijms17111738
PMCID: PMC5133773

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Impact of SNPs on Protein Phosphorylation Status in Rice (Oryza sativa L.).PMID 27845739Read ↗

PhosSNP for systematic analysis of genetic polymorphisms that influence protein phosphorylation.Semantic proximity Read ↗

Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana.Semantic proximity Read ↗

Genome-wide analysis to predict protein sequence variations that change phosphorylation sites or their corresponding kinases.Semantic proximity Read ↗

Computational analysis of phosphoproteomics: progresses and perspectives.Semantic proximity Read ↗

Phosphorylation states of cell cycle and DNA repair proteins can be altered by the nsSNPs.Semantic proximity Read ↗

EPSD 2.0: An Updated Database of Protein Phosphorylation Sites across Eukaryotic SpeciesSemantic proximity Read ↗

PhosphoPICK-SNP: quantifying the effect of amino acid variants on protein phosphorylation.Semantic proximity Read ↗

AWESOME: a database of SNPs that affect protein post-translational modifications.Semantic proximity Read ↗

A panoramic perspective on human phosphositesSemantic proximity Read ↗

A comprehensive analysis of protein phosphatases in rice and ArabidopsisSemantic proximity Read ↗

iEKPD 2.0: an update with rich annotations for eukaryotic protein kinases, protein phosphatases and proteins containing phosphoprotein-binding domainsSemantic proximity Read ↗

PlantsP: a functional genomics database for plant phosphorylation.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.