Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platform.

Scientific reports - 29 Jul 2016

Li Jin, Wang Limei, Jiang Tao, Wang Jizhe, Li Xue, Liu Xiaoyan, Wang Chunyu, Teng Zhixia, Zhang Ruijie, Lv Hongchao, Guo Maozu

Abstract excerpt

Genome-wide association studies (GWASs) have mined many common genetic variants associated with human complex traits like diseases. After that, the functional annotation and enrichment analysis of significant SNPs are important tasks. Classic methods are always based on physical positions of SNPs and genes. Expression quantitative trait loci (eQTLs) are genomic loci that contribute to variation in gene expression...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Nucleic Acid
Share to Gene Ontology

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Polymorphism, Single Nucleotide

Share to Sequence Analysis, DNA

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 27470167
DOI: 10.1038/srep30595
PMCID: PMC4965794

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platform.PMID 27470167Read ↗

rSNPBase 3.0: an updated database of SNP-related regulatory elements, element-gene pairs and SNP-based gene regulatory networks.Semantic proximity Read ↗

Integration of SNP Disease Association, eQTL, and Enrichment Analyses to Identify Risk SNPs and Susceptibility Genes in Chronic Obstructive Pulmonary Disease.Semantic proximity Read ↗

rSNPBase: a database for curated regulatory SNPs.Semantic proximity Read ↗

PGA: post-GWAS analysis for disease gene identification.Semantic proximity Read ↗

GSEA-SNP: applying gene set enrichment analysis to SNP data from genome-wide association studies.Semantic proximity Read ↗

Integrating regulatory features data for prediction of functional disease-associated SNPs.Semantic proximity Read ↗

SNPpath: characterizing cattle SNPs by enriched pathway terms.Semantic proximity Read ↗

Comprehensive evaluation of disease- and trait-specific enrichment for eight functional elements among GWAS-identified variants.Semantic proximity Read ↗

SNP Function Portal: a web database for exploring the function implication of SNP alleles.Semantic proximity Read ↗

ICSNPathway: identify candidate causal SNPs and pathways from genome-wide association study by one analytical framework.Semantic proximity Read ↗

Data integration for functional annotation of regulatory single nucleotide polymorphisms associated with Alzheimer's disease susceptibility.Semantic proximity Read ↗

i-GSEA4GWAS: a web server for identification of pathways/gene sets associated with traits by applying an improved gene set enrichment analysis to genome-wide association study.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.