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Article

megasat: automated inference of microsatellite genotypes from sequence data.

Molecular ecology resources - 1 Mar 2017

Zhan Luyao, Paterson Ian G, Fraser Bonnie A, Watson Beth, Bradbury Ian R, Nadukkalam Ravindran Praveen, Reznick David, Beiko Robert G, Bentzen Paul

Abstract excerpt

megasat is software that enables genotyping of microsatellite loci using next-generation sequencing data. Microsatellites are amplified in large multiplexes, and then sequenced in pooled amplicons. megasat reads sequence files and automatically scores microsatellite genotypes. It uses fuzzy matches to allow for sequencing errors and applies decision rules to account for amplification artefacts, including...

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PMID: 27333119
DOI: 10.1111/1755-0998.12561

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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