Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

popSTR: population-scale detection of STR variants.

Bioinformatics (Oxford, England) - 15 Dec 2017

Kristmundsdóttir Snædís, Sigurpálsdóttir Brynja D, Kehr Birte, Halldórsson Bjarni V

Abstract excerpt

MOTIVATION: Microsatellites, also known as short tandem repeats (STRs), are tracts of repetitive DNA sequences containing motifs ranging from two to six bases. Microsatellites are one of the most abundant type of variation in the human genome, after single nucleotide polymorphisms (SNPs) and Indels. Microsatellite analysis has a wide range of applications, including medical genetics, forensics and construction of...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genotype
Share to Microsatellite Repeats
Share to Software

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Whole Genome Sequencing

Source

Identifiers

PMID: 27591079
DOI: 10.1093/bioinformatics/btw568

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

popSTR: population-scale detection of STR variants.PMID 27591079Read ↗

popSTR2 enables clinical and population-scale genotyping of microsatellites.Semantic proximity Read ↗

Genome-wide profiling of heritable and de novo STR variations.Semantic proximity Read ↗

Characterization of genetic sequence variation of 58 STR loci in four major population groups.Semantic proximity Read ↗

lobSTR: A short tandem repeat profiler for personal genomes.Semantic proximity Read ↗

STRinNGS v2.0: Improved tool for analysis and reporting of STR sequencing data.Semantic proximity Read ↗

Genome-wide profiling of heritable and <i>de novo</i> STR variationsSemantic proximity Read ↗

STRsensor: a computationally efficient method for STR allele-typing from massively parallel sequencing data.Semantic proximity Read ↗

The Landscape of Human STR VariationSemantic proximity Read ↗

The landscape of human STR variation.Semantic proximity Read ↗

A comparison of software for analysis of rare and common short tandem repeat (STR) variation using human genome sequences from clinical and population-based samplesSemantic proximity Read ↗

A comparison of software for analysis of rare and common short tandem repeat (STR) variation using human genome sequences from clinical and population-based samples.Semantic proximity Read ↗

Profiling short tandem repeats from short reads.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.