Article
Comparison of different imputation methods from low- to high-density panels using Chinese Holstein cattle.
Animal : an international journal of animal bioscience - 1 May 2013
Weng Z, Zhang Z, Zhang Q, Fu W, He S, Ding X
Abstract excerpt
Imputation of high-density genotypes from low- or medium-density platforms is a promising way to enhance the efficiency of whole-genome selection programs at low cost. In this study, we compared the efficiency of three widely used imputation algorithms (fastPHASE, BEAGLE and findhap) using Chinese Holstein cattle with Illumina BovineSNP50 genotypes. A total of 2108 cattle were randomly divided into a reference...
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