Article
Ribosomal protein genes are highly enriched among genes with allele-specific expression in the interspecific F1 hybrid catfish.
Molecular genetics and genomics : MGG - 1 Jun 2016
Chen Ailu, Wang Ruijia, Liu Shikai, Peatman Eric, Sun Luyang, Bao Lisui, Jiang Chen, Li Chao, Li Yun, Zeng Qifan, Liu Zhanjiang
Abstract excerpt
Interspecific hybrids provide a rich source for the analysis of allele-specific expression (ASE). In this work, we analyzed ASE in F1 hybrid catfish using RNA-Seq datasets. While the vast majority of genes were expressed with both alleles, 7-8 % SNPs exhibited significant differences in allele ratios of expression. Of the 66,251 and 177,841 SNPs identified from the datasets of the liver and gill, 5420 (8.2 %) and...
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