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Structural Variant Detection by Large-scale Sequencing Reveals New Evolutionary Evidence on Breed Divergence between Chinese and European Pigs.

Scientific reports - 5 Jan 2016

Zhao Pengju, Li Junhui, Kang Huimin, Wang Haifei, Fan Ziyao, Yin Zongjun, Wang Jiafu, Zhang Qin, Wang Zhiquan, Liu Jian-Feng

Abstract excerpt

In this study, we performed a genome-wide SV detection among the genomes of thirteen pigs from diverse Chinese and European originated breeds by next genetation sequencing, and constrcuted a single-nucleotide resolution map involving 56,930 putative SVs. We firstly identified a SV hotspot spanning 35 Mb region on the X chromosome specifically in the genomes of Chinese originated individuals. Further scrutinizing...

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PMID: 26729041
DOI: 10.1038/srep18501
PMCID: PMC4700453

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