Article
Resequencing diverse Chinese indigenous breeds to enrich the map of genomic variations in swine.
Genomics - 1 Nov 2015
Kang Huimin, Wang Haifei, Fan Ziyao, Zhao Pengju, Khan Amjad, Yin Zongjun, Wang Jiafu, Bao Wenbin, Wang Aiguo, Zhang Qin, Liu Jian-Feng
Abstract excerpt
To enrich the map of genomic variations in swine, we randomly sequenced 13 domestic and wild individuals from China and Europe. We detected approximately 28.1 million single nucleotide variants (SNVs) and 3.6 million short insertions and deletions (INDELs), of which 2,530,248 SNVs and 3,456,626 INDELs were firstly identified compared with dbSNP 143. Moreover, 208,687 SNVs and 24,161 INDELs were uniquely observed...
Topics
- Animals
- Breeding
- DNA Mutational Analysis
- Female
- Genetic Variation
- Genome
- Genomics
- Male
- Swine