Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

SPMM: estimating infection duration of multivariant HIV-1 infections.

Bioinformatics (Oxford, England) - 1 May 2016

Love Tanzy M T, Park Sung Yong, Giorgi Elena E, Mack Wendy J, Perelson Alan S, Lee Ha Youn

Abstract excerpt

MOTIVATION: Illustrating how HIV-1 is transmitted and how it evolves in the following weeks is an important step for developing effective vaccination and prevention strategies. It is currently possible through DNA sequencing to account for the diverse array of viral strains within an infected individual. This provides an unprecedented opportunity to pinpoint when each patient was infected and which viruses were...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genetic Variation
Share to HIV-1
Share to HIV Infections

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Models, Theoretical

Share to Sequence Analysis, DNA

Source

Open in PubMed Open full text

Identifiers

PMID: 26722117
DOI: 10.1093/bioinformatics/btv749
PMCID: PMC4907399

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

SPMM: estimating infection duration of multivariant HIV-1 infections.PMID 26722117Read ↗

Decoding HIV-1 Next Move Through Matrix Protein p17 Quasi-Species.Semantic proximity Read ↗

Short communication: HIV-1 gag genetic variation in a single acutely infected participant defined by high-resolution deep sequencing.Semantic proximity Read ↗

Modeling the within-host dynamics of HIV infectionSemantic proximity Read ↗

Interpreting HIV Diagnostic Histories into Infection Time Estimates: Analytical Framework and Online ToolSemantic proximity Read ↗

Estimating time since infection in early homogeneous HIV-1 samples using a poisson model.Semantic proximity Read ↗

Long-Read Deep Sequencing Reveals High Rates of Multilineage Transmission and Rapid Viral Population Changes in Acute HIV InfectionSemantic proximity Read ↗

Bayesian Phylogenetic Inference of HIV Latent Lineage Ages Using Serial SequencesSemantic proximity Read ↗

Integrating Phylodynamics and Epidemiology to Estimate Transmission Diversity in Viral EpidemicsSemantic proximity Read ↗

Estimating time of HIV-1 infection from next-generation sequence diversitySemantic proximity Read ↗

HIV heterogeneity and disease progression in AIDS: a model of continuous virus adaptation.Semantic proximity Read ↗

Estimating time of HIV-1 infection from next-generation sequence diversitySemantic proximity Read ↗

Variability of HIV infections.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.