Article
Genetic and resistance phenotypic subtyping of Salmonella Saintpaul isolates from various food sources and humans: Phylogenetic concordance in combinatory analyses.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Dec 2015
Hayford Alice E, Brown Eric W, Zhao Shaohua, Mammel Mark K, Gangiredla Jayanthi, Abbott Jason W, Friedman Sharon L, Ayers Sherry L, Lewis Jada L, Lacher David W, McDermott Patrick, Elkins Christopher A
Abstract excerpt
Bacterial pathogen subtyping for public health traceback of foodborne outbreaks has increasingly produced a number of disparate molecular techniques of varying resolution. Here, we bridge the molecular divide across three methodologies, transform data types for cross-comparison, and test phylogenetic concordance. Single nucleotide polymorphism (SNP) discovery was combined with pulsed-field gel electrophoresis...
Topics
- Animals
- Anti-Bacterial Agents
- Bacterial Typing Techniques
- Drug Resistance, Bacterial
- Electrophoresis, Gel, Pulsed-Field
- Food Microbiology
- Genes, Bacterial
- Genes, Essential