Article
Critical limitations of prognostic signatures based on risk scores summarized from gene expression levels: a case study for resected stage I non-small-cell lung cancer.
Briefings in bioinformatics - 1 Mar 2016
Qi Lishuang, Chen Libin, Li Yang, Qin Yuan, Pan Rufei, Zhao Wenyuan, Gu Yunyan, Wang Hongwei, Wang Ruiping, Chen Xiangqi, Guo Zheng
Abstract excerpt
Most of current gene expression signatures for cancer prognosis are based on risk scores, usually calculated as some summaries of expression levels of the signature genes, whose applications require presetting risk score thresholds and data normalization. In this study, we demonstrate the critical limitations of such type of signatures that the risk scores of samples will change greatly when they are normalized...
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