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Article

Identification of indels in next-generation sequencing data.

BMC bioinformatics - 13 Feb 2015

Ratan Aakrosh, Olson Thomas L, Loughran Thomas P, Miller Webb

Abstract excerpt

BACKGROUND: The discovery and mapping of genomic variants is an essential step in most analysis done using sequencing reads. There are a number of mature software packages and associated pipelines that can identify single nucleotide polymorphisms (SNPs) with a high degree of concordance. However, the same cannot be said for tools that are used to identify the other types of variants. Indels represent the second...

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Identifiers

PMID: 25879703
DOI: 10.1186/s12859-015-0483-6
PMCID: PMC4339746

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