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Article

Ultrafast SNP analysis using the Burrows-Wheeler transform of short-read data.

Bioinformatics (Oxford, England) - 15 May 2015

Kimura Kouichi, Koike Asako

Abstract excerpt

MOTIVATION: Sequence-variation analysis is conventionally performed on mapping results that are highly redundant and occasionally contain undesirable heuristic biases. A straightforward approach to single-nucleotide polymorphism (SNP) analysis, using the Burrows-Wheeler transform (BWT) of short-read data, is proposed. RESULTS: The BWT makes it possible to simultaneously process collections of read fragments of...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 25609790
DOI: 10.1093/bioinformatics/btv024

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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