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Article

Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica.

Genome biology - 1 Jan 2014

Schatz Michael C, Maron Lyza G, Stein Joshua C, Hernandez Wences Alejandro, Gurtowski James, Biggers Eric, Lee Hayan, Kramer Melissa, Antoniou Eric, Ghiban Elena, Wright Mark H, Chia Jer-ming, Ware Doreen, McCouch Susan R, McCombie W Richard

Abstract excerpt

BACKGROUND: The use of high throughput genome-sequencing technologies has uncovered a large extent of structural variation in eukaryotic genomes that makes important contributions to genomic diversity and phenotypic variation. When the genomes of different strains of a given organism are compared, whole genome resequencing data are typically aligned to an established reference sequence. However, when the...

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Identifiers

PMID: 25468217
DOI: 10.1186/PREACCEPT-2784872521277375
PMCID: PMC4268812

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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