Article
Genome wide SNP identification in chickpea for use in development of a high density genetic map and improvement of chickpea reference genome assembly.
BMC genomics - 23 Aug 2014
Deokar Amit A, Ramsay Larissa, Sharpe Andrew G, Diapari Marwan, Sindhu Anoop, Bett Kirstin, Warkentin Thomas D, Tar'an Bunyamin
Abstract excerpt
BACKGROUND: In the whole genome sequencing, genetic map provides an essential framework for accurate and efficient genome assembly and validation. The main objectives of this study were to develop a high-density genetic map using RAD-Seq (Restriction-site Associated DNA Sequencing) genotyping-by-sequencing (RAD-Seq GBS) and Illumina GoldenGate assays, and to examine the alignment of the current map with the...
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