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Article

High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea.

Scientific reports - 25 Aug 2015

Gaur Rashmi, Jeena Ganga, Shah Niraj, Gupta Shefali, Pradhan Seema, Tyagi Akhilesh K, Jain Mukesh, Chattopadhyay Debasis, Bhatia Sabhyata

Abstract excerpt

This study presents genome-wide discovery of SNPs through next generation sequencing of the genome of Cicer reticulatum. Mapping of the C. reticulatum sequenced reads onto the draft genome assembly of C. arietinum (desi chickpea) resulted in identification of 842,104 genomic SNPs which were utilized along with an additional 36,446 genic SNPs identified from transcriptome sequences of the aforementioned varieties....

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Identifiers

PMID: 26303721
DOI: 10.1038/srep13387
PMCID: PMC4548218

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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