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Sequencing and annotated analysis of the Holstein cow genome.

Mammalian genome : official journal of the International Mammalian Genome Society - 1 Aug 2013

Kõks Sulev, Lilleoja Rutt, Reimann Ene, Salumets Andres, Reemann Paula, Jaakma Ülle

Abstract excerpt

The aim of our study was to create a high-quality Holstein cow genome reference sequence and describe the different types of variations in this genome compared to the reference Hereford breed. We generated one fragment and three mate-paired libraries from genomic DNA. Raw files were mapped and paired to the reference cow (Bos taurus) genome assemblies bosTau6/UMD_3.1. BioScope (v1.3) software was used for mapping...

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Cattle
Chromosome Mapping
Gene Library
Genome
INDEL Mutation

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Molecular Sequence Annotation

Reference Standards

Sequence Alignment

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PMID: 23893136
DOI: 10.1007/s00335-013-9464-0

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