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Article

Encore: Genetic Association Interaction Network centrality pipeline and application to SLE exome data.

Genetic epidemiology - 1 Sept 2013

Davis Nicholas A, Lareau Caleb A, White Bill C, Pandey Ahwan, Wiley Graham, Montgomery Courtney G, Gaffney Patrick M, McKinney B A

Abstract excerpt

Open source tools are needed to facilitate the construction, analysis, and visualization of gene-gene interaction networks for sequencing data. To address this need, we present Encore, an open source network analysis pipeline for genome-wide association studies and rare variant data. Encore constructs Genetic Association Interaction Networks or epistasis networks using two optional approaches: our previous...

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PMID: 23740754
DOI: 10.1002/gepi.21739
PMCID: PMC3955726

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CMTM4
NCF2

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