Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genomically and biochemically accurate metabolic reconstruction of Methanosarcina barkeri Fusaro, iMG746.

Biotechnology journal - 1 Sept 2013

Gonnerman Matthew C, Benedict Matthew N, Feist Adam M, Metcalf William W, Price Nathan D

Abstract excerpt

Methanosarcina barkeri is an Archaeon that produces methane anaerobically as the primary byproduct of its metabolism. M. barkeri can utilize several substrates for ATP and biomass production including methanol, acetate, methyl amines, and a combination of hydrogen and carbon dioxide. In 2006, a metabolic reconstruction of M. barkeri, iAF692, was generated based on a draft genome annotation. The iAF692...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Biomass
Share to Computer Simulation
Share to Genome, Archaeal

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Metabolic Networks and Pathways

Share to Methane

Share to Models, Biological

Share to Phenotype

Share to Reproducibility of Results

Source

Identifiers

PMID: 23420771
DOI: 10.1002/biot.201200266

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genomically and biochemically accurate metabolic reconstruction of Methanosarcina barkeri Fusaro, iMG746.PMID 23420771Read ↗

Genome-scale metabolic reconstruction and hypothesis testing in the methanogenic archaeon Methanosarcina acetivorans C2A.Semantic proximity Read ↗

The genome of M. acetivorans reveals extensive metabolic and physiological diversity.Semantic proximity Read ↗

Genetic, Genomic, and Transcriptomic Studies of Pyruvate Metabolism in Methanosarcina barkeri Fusaro.Semantic proximity Read ↗

Genetic, Biochemical, and Molecular Characterization of Methanosarcina barkeri Mutants Lacking Three Distinct Classes of Hydrogenase.Semantic proximity Read ↗

Phylogenomic proximity and metabolic discrepancy of Methanosarcina mazei Go1 across methanosarcinal genomes.Semantic proximity Read ↗

The Entner-Doudoroff Pathway Is an Essential Metabolic Route for Methylotuvimicrobium buryatense 5GB1C.Semantic proximity Read ↗

Comparative genomics of three Methanocellales strains reveal novel taxonomic and metabolic features.Semantic proximity Read ↗

A mutant ('lab strain') of the hyperthermophilic archaeon Pyrococcus furiosus, lacking flagella, has unusual growth physiology.Semantic proximity Read ↗

Genome-scale reconstruction of the metabolic network in Yersinia pestis, strain 91001.Semantic proximity Read ↗

Loss of the <i>mtr</i> operon in <i>Methanosarcina</i> blocks growth on methanol, but not methanogenesis, and reveals an unknown methanogenic pathwaySemantic proximity Read ↗

Construction and elementary mode analysis of a metabolic model for Shewanella oneidensis MR-1.Semantic proximity Read ↗

Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.