Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens.

doi:10.1371/journal.pgen.1003233

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Article

Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens.

PLoS genetics - 1 Jan 2013

Condon Bradford J, Leng Yueqiang, Wu Dongliang, Bushley Kathryn E, Ohm Robin A, Otillar Robert, Martin Joel, Schackwitz Wendy, Grimwood Jane, MohdZainudin NurAinizzati, Xue Chunsheng, Wang Rui, Manning Viola A, Dhillon Braham, Tu Zheng Jin, Steffenson Brian J, Salamov Asaf, Sun Hui, Lowry Steve, LaButti Kurt, Han James, Copeland Alex, Lindquist Erika, Barry Kerrie, Schmutz Jeremy, Baker Scott E, Ciuffetti Lynda M, Grigoriev Igor V, Zhong Shaobin, Turgeon B Gillian

Abstract excerpt

The genomes of five Cochliobolus heterostrophus strains, two Cochliobolus sativus strains, three additional Cochliobolus species (Cochliobolus victoriae, Cochliobolus carbonum, Cochliobolus miyabeanus), and closely related Setosphaeria turcica were sequenced at the Joint Genome Institute (JGI). The datasets were used to identify SNPs between strains and species, unique genomic regions, core secondary metabolism...

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PMID: 23357949
DOI: 10.1371/journal.pgen.1003233
PMCID: PMC3554632

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