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Benefit-of-doubt (BOD) scoring: a sequencing-based method for SNP candidate assessment from high to medium read number data sets.

Genomics - 1 Mar 2013

Sedlazeck Fritz Joachim, Talloji Prabhavathi, von Haeseler Arndt, Bachmair Andreas

Abstract excerpt

Identification of single nucleotide polymorphisms (SNPs) is a key element in sequence-based genetic analysis. Next generation sequencing offers a cost-effective basis to generate the necessary, large sequence data sets, and bioinformatic methods are being developed to process sequencing machine readouts. We were interested in detection of SNPs in a 350 kb region of an EMS-mutagenized Arabidopsis chromosome 3. The...

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Identifiers

PMID: 23246509
DOI: 10.1016/j.ygeno.2012.12.001
PMCID: PMC3580289

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

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