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Article

The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity.

PloS one - 1 Jan 2012

Ziemert Nadine, Podell Sheila, Penn Kevin, Badger Jonathan H, Allen Eric, Jensen Paul R

Abstract excerpt

New bioinformatic tools are needed to analyze the growing volume of DNA sequence data. This is especially true in the case of secondary metabolite biosynthesis, where the highly repetitive nature of the associated genes creates major challenges for accurate sequence assembly and analysis. Here we introduce the web tool Natural Product Domain Seeker (NaPDoS), which provides an automated method to assess the...

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PMID: 22479523
DOI: 10.1371/journal.pone.0034064
PMCID: PMC3315503

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Source receipt: pubmed, retrieved 7 Sept 2026.

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