Article
Blindly using Wald's test can miss rare disease-causal variants in case-control association studies.
Annals of human genetics - 1 Mar 2012
Xing Guan, Lin Chang-Yun, Wooding Stephen P, Xing Chao
Abstract excerpt
There are four tests--the likelihood ratio (LR) test, Wald's test, the score test and the exact test--commonly employed in genetic association studies. On comparison of the four tests, we found that Wald's test, popular in genome-wide screens due to its low computational demands, exhibited a paradoxical behaviour in that the test statistic decreased as the effect size of the variant increased, resulting in a loss...
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