Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Using pyrosequencing to measure allele-specific mRNA abundance and infer the effects of cis- and trans-regulatory differences.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2011

Wittkopp Patricia J

Abstract excerpt

Changes in gene expression are an important source of phenotypic differences within and between species. Differences in RNA abundance can be readily quantified between genotypes using a variety of tools, including microarrays, quantitative real-time PCR, cDNA sequencing, and in situ hybridization...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to DNA
Share to DNA, Complementary
Share to DNA Primers

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome

Share to Regulatory Sequences, Nucleic Acid

Share to RNA, Messenger

Share to Sequence Analysis, DNA

Share to Temperature

Source

Identifiers

PMID: 22065446
DOI: 10.1007/978-1-61779-228-1_18

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 4 Sept 2026. Prepared record publication-22065446-2026-09-04.2. Manifest publication-graph-cohort-2026-09-04.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 4 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Using pyrosequencing to measure allele-specific mRNA abundance and infer the effects of cis- and trans-regulatory differences.PMID 22065446Read ↗

Detection of allelic imbalance in gene expression using pyrosequencing.Semantic proximity Read ↗

Molecular and evolutionary processes generating variation in gene expression.Semantic proximity Read ↗

From phenotype to genotype.Semantic proximity Read ↗

Genome-wide allele- and strand-specific expression profiling.Semantic proximity Read ↗

The influence of genetic variation on gene expression.Semantic proximity Read ↗

Research progress in allele-specific expression and its regulatory mechanisms.Semantic proximity Read ↗

Inference of allele-specific expression from RNA-seq data.Semantic proximity Read ↗

Investigating cis-acting regulatory variation using assays of relative allelic expression.Semantic proximity Read ↗

Alternative strategies for development of a reference transcriptome for quantification of allele specific expression in organisms having sparse genomic resources.Semantic proximity Read ↗

Sources of bias in measures of allele-specific expression derived from RNA-sequence data aligned to a single reference genome.Semantic proximity Read ↗

Using Droplet Digital PCR to Analyze Allele-Specific RNA Expression.Semantic proximity Read ↗

Comparing computational methods for identification of allele-specific expression based on next generation sequencing data.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.