Article
PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq).
Bioinformatics (Oxford, England) - 15 Dec 2011
Kofler Robert, Pandey Ram Vinay, Schlötterer Christian
Abstract excerpt
SUMMARY: Sequencing pooled DNA samples (Pool-Seq) is the most cost-effective approach for the genome-wide comparison of population samples. Here, we introduce PoPoolation2, the first software tool specifically designed for the comparison of populations with Pool-Seq data. PoPoolation2 implements a range of commonly used measures of differentiation (F(ST), Fisher's exact test and Cochran-Mantel-Haenszel test) that...
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