f-Statistics estimation and admixture graph construction with Pool-Seq or allele count data using the R package poolfstat.

Abstract excerpt

By capturing various patterns of the structuring of genetic variation across populations, f -statistics have proved highly effective for the inference of demographic history. Such statistics are defined as covariances of SNP allele frequency differences among sets of populations without requiring haplotype information and are hence particularly relevant for the analysis of pooled sequencing (Pool-Seq) data. We...

Topics

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• Alleles
• Gene Frequency
• Genetics, Population
• Genotype
• High-Throughput Nucleotide Sequencing