Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

ALG: automated genotype calling of Luminex assays.

PloS one - 6 May 2011

Bourgey Mathieu, Lariviere Mathieu, Richer Chantal, Sinnett Daniel

Abstract excerpt

Single nucleotide polymorphisms (SNPs) are the most commonly used polymorphic markers in genetics studies. Among the different platforms for SNP genotyping, Luminex is one of the less exploited mainly due to the lack of a robust (semi-automated and replicable) freely available genotype calling software. Here we describe a clustering algorithm that provides automated SNP calls for Luminex genotyping assays. We...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Biological Assay
Share to Child, Preschool
Share to Genotype

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Alleles

Share to Algorithms

Share to Polymorphism, Single Nucleotide

Source

Open in PubMed Open full text

Identifiers

PMID: 21573116
DOI: 10.1371/journal.pone.0019368
PMCID: PMC3089621

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

ALG: automated genotype calling of Luminex assays.PMID 21573116Read ↗

Comparison of genotype clustering tools with rare variants.Semantic proximity Read ↗

iCall: a genotype-calling algorithm for rare, low-frequency and common variants on the Illumina exome array.Semantic proximity Read ↗

optiCall: a robust genotype-calling algorithm for rare, low-frequency and common variants.Semantic proximity Read ↗

Automated SNP genotype clustering algorithm to improve data completeness in high-throughput SNP genotyping datasets from custom arrays.Semantic proximity Read ↗

KRLMM: an adaptive genotype calling method for common and low frequency variants.Semantic proximity Read ↗

The LightTyper: high-throughput genotyping using fluorescent melting curve analysis.Semantic proximity Read ↗

Automated fluorescent genotyping.Semantic proximity Read ↗

Accurate automated clustering of two-dimensional data for single-nucleotide polymorphism genotyping by a combination of clustering methods: evaluation by large-scale real data.Semantic proximity Read ↗

GEL: a novel genotype calling algorithm using empirical likelihood.Semantic proximity Read ↗

SNPman: a program for genotype calling using run data from TaqMan allelic discrimination.Semantic proximity Read ↗

Optimal genotype determination in highly multiplexed SNP data.Semantic proximity Read ↗

Pharmacogenetics using Luminex® xMAP® technology: a method for developing a custom multiplex single nucleotide polymorphism mutation assay.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.