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Article

In vitro vs in silico detected SNPs for the development of a genotyping array: what can we learn from a non-model species?

PloS one - 9 Jun 2010

Lepoittevin Camille, Frigerio Jean-Marc, Garnier-Géré Pauline, Salin Franck, Cervera María-Teresa, Vornam Barbara, Harvengt Luc, Plomion Christophe

Abstract excerpt

BACKGROUND: There is considerable interest in the high-throughput discovery and genotyping of single nucleotide polymorphisms (SNPs) to accelerate genetic mapping and enable association studies. This study provides an assessment of EST-derived and resequencing-derived SNP quality in maritime pine (Pinus pinaster Ait.), a conifer characterized by a huge genome size ( approximately 23.8 Gb/C). METHODOLOGY/PRINCIPAL...

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Identifiers

PMID: 20543950
DOI: 10.1371/journal.pone.0011034
PMCID: PMC2882948

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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