Population structure with localized haplotype clusters.

doi:10.1534/genetics.110.116681

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Article

Population structure with localized haplotype clusters.

Genetics - 1 Aug 2010

Browning Sharon R, Weir Bruce S

Abstract excerpt

We propose a multilocus version of F(ST) and a measure of haplotype diversity using localized haplotype clusters. Specifically, we use haplotype clusters identified with BEAGLE, which is a program implementing a hidden Markov model for localized haplotype clustering and performing several functio...

Topics

Africa
Algorithms
Asia
Chromosomes, Human, Pair 22
Cluster Analysis
Europe
Genetic Variation
Genetics, Population
Haplotypes
Humans
Markov Chains
Mexico
Polymorphism, Single Nucleotide
Software

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