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Article

Consensus generation and variant detection by Celera Assembler.

Bioinformatics (Oxford, England) - 15 Apr 2008

Denisov Gennady, Walenz Brian, Halpern Aaron L, Miller Jason, Axelrod Nelson, Levy Samuel, Sutton Granger

Abstract excerpt

MOTIVATION: We present an algorithm to identify allelic variation given a Whole Genome Shotgun (WGS) assembly of haploid sequences, and to produce a set of haploid consensus sequences rather than a single consensus sequence. Existing WGS assemblers take a column-by-column approach to consensus generation, and produce a single consensus sequence which can be inconsistent with the underlying haploid alleles, and...

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PMID: 18321888
DOI: 10.1093/bioinformatics/btn074

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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