Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

The lineaging of fluorescently-labeled Caenorhabditis elegans embryos with StarryNite and AceTree.

Nature protocols - 1 Jan 2006

Murray John Isaac, Bao Zhirong, Boyle Thomas J, Waterston Robert H

Abstract excerpt

Lineage analysis of Caenorhabditis elegans is a powerful tool for characterizing developmental phenotypes and embryonic gene-expression patterns. We present a detailed protocol for the lineaging of embryos by computational analysis of 4D images of embryos that ubiquitously express histone-GFP (gr...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Caenorhabditis elegans
Share to Cell Lineage
Share to Embryo, Nonmammalian

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Gene Expression Profiling

Share to Green Fluorescent Proteins

Share to Image Processing, Computer-Assisted

Share to Phenotype

Share to Software

Source

Identifiers

PMID: 17406437
DOI: 10.1038/nprot.2006.222

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026. Prepared record publication-17406437-2026-09-02.2. Manifest publication-graph-cohort-2026-09-02.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

The lineaging of fluorescently-labeled Caenorhabditis elegans embryos with StarryNite and AceTree.PMID 17406437Read ↗

AceTree: a tool for visual analysis of Caenorhabditis elegans embryogenesis.Semantic proximity Read ↗

Automated lineage and expression profiling in live Caenorhabditis elegans embryos.Semantic proximity Read ↗

Molecular and genetic approaches for the analysis of C. elegans neuronal development.Semantic proximity Read ↗

Cell identification and cell lineage analysis.Semantic proximity Read ↗

Digital development: a database of cell lineage differentiation in C. elegans with lineage phenotypes, cell-specific gene functions and a multiscale model.Semantic proximity Read ↗

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain by scGESTALTSemantic proximity Read ↗

Combinatorial decoding of the invariant C. elegans embryonic lineage in space and time.Semantic proximity Read ↗

Employing the one-cell C. elegans embryo to study cell division processes.Semantic proximity Read ↗

Specialized chromosomes and their uses in Caenorhabditis elegans.Semantic proximity Read ↗

De novo inference of systems-level mechanistic models of development from live-imaging-based phenotype analysis.Semantic proximity Read ↗

A Simple Apparatus for Individual C. elegans Culture.Semantic proximity Read ↗

Lineage Tracing and Single-Cell RNA-seq in C. elegans to Analyze Transgenerational Epigenetic Phenotypes Inherited from Germ Cells.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.