Article
Extracting characteristic properties of fitness landscape from in vitro molecular evolution: a case study on infectivity of fd phage to E.coli.
Journal of theoretical biology - 7 Jun 2007
Aita Takuyo, Hayashi Yuuki, Toyota Hitoshi, Husimi Yuzuru, Urabe Itaru, Yomo Tetsuya
Abstract excerpt
We have developed a methodology for extracting characteristic properties of a fitness landscape of interest by analyzing fitness data on an in vitro molecular evolution. The in vitro evolution is required to be conducted as the following "adaptive walk": a single parent sequence generates N mutant sequences as its offsprings, and the fittest individual among the N offsprings will become a new parent in the next...
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