Codon phylogenetic distance.

doi:10.1016/j.compbiolchem.2006.11.001

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Article

Codon phylogenetic distance.

Computational biology and chemistry - 1 Feb 2007

Michel Christian J

Abstract excerpt

We develop here an analytical evolution model based on a trinucleotide mutation matrix 64x64 with nine substitution parameters associated with the three types of substitutions in the three trinucleotide sites and with non-zero elements on its main diagonal. It generalizes the previous models based on the nucleotide mutation matrices 4x4 and the trinucleotide mutation matrices 64x64 with zero elements on its main...

Topics

Codon
Evolution, Molecular
Models, Genetic
Mutation
Phylogeny
Sequence Analysis, DNA

Source

Open in PubMed

Identifiers

PMID: 17257898
DOI: 10.1016/j.compbiolchem.2006.11.001

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