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Article

SEAN: SNP prediction and display program utilizing EST sequence clusters.

Bioinformatics (Oxford, England) - 15 Feb 2006

Huntley Derek, Baldo Angela, Johri Saurabh, Sergot Marek

Abstract excerpt

SEAN is an application that predicts single nucleotide polymorphisms (SNPs) using multiple sequence alignments produced from expressed sequence tag (EST) clusters. The algorithm uses rules of sequence identity and SNP abundance to determine the quality of the prediction. A Java viewer is provided to display the EST alignments and predicted SNPs.

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 16357032
DOI: 10.1093/bioinformatics/btk006

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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