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Article

A high-throughput apple SNP genotyping platform using the GoldenGate™ assay.

Gene - 25 Feb 2012

Khan M Awais, Han Yuepeng, Zhao Youfu Frank, Korban Schuyler S

Abstract excerpt

EST data generated from 14 apple genotypes were downloaded from NCBI and mapped against a reference EST assembly to identify Single Nucleotide Polymorphisms (SNPs). Mapping of these SNPs was undertaken using 90% of sequence similarity and minimum coverage of four reads at each SNP position. In total, 37,807 SNPs were identified with an average of one SNP every 187 bp from a total of 6888 unique EST contigs....

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PMID: 22209719
DOI: 10.1016/j.gene.2011.12.001

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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