Article
Geometry-based flexible and symmetric protein docking.
Proteins - 1 Aug 2005
Schneidman-Duhovny Dina, Inbar Yuval, Nussinov Ruth, Wolfson Haim J
Abstract excerpt
We present a set of geometric docking algorithms for rigid, flexible, and cyclic symmetry docking. The algorithms are highly efficient and have demonstrated very good performance in CAPRI Rounds 3-5. The flexible docking algorithm, FlexDock, is unique in its ability to handle any number of hinges in the flexible molecule, without degradation in run-time performance, as compared to rigid docking. The algorithm for...
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