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Article

GATA: a graphic alignment tool for comparative sequence analysis.

BMC bioinformatics - 17 Jan 2005

Nix David A, Eisen Michael B

Abstract excerpt

BACKGROUND: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved sequence elements are collinear. This assumption appears valid when comparing orthologous protein coding sequences. Functional constraints on proteins provide strong selective pressure against sequence inversions, and minimize sequence...

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Identifiers

PMID: 15655071
DOI: 10.1186/1471-2105-6-9
PMCID: PMC546196

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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