Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

HapScope: a software system for automated and visual analysis of functionally annotated haplotypes.

Nucleic acids research - 1 Dec 2002

Zhang Jinghui, Rowe William L, Struewing Jeffery P, Buetow Kenneth H

Abstract excerpt

We have developed a software analysis package, HapScope, which includes a comprehensive analysis pipeline and a sophisticated visualization tool for analyzing functionally annotated haplotypes. The HapScope analysis pipeline supports: (i) computational haplotype construction with an expectation-maximization or Bayesian statistical algorithm; (ii) SNP classification by protein coding change, homology to model...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Algorithms
Share to Apolipoproteins E
Share to Automation

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Chromosomes, Human, Pair 5

Share to Computer Graphics

Share to Lipoprotein Lipase

Share to Reproducibility of Results

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 12466546
DOI: 10.1093/nar/gkf654
PMCID: PMC137968

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

HapScope: a software system for automated and visual analysis of functionally annotated haplotypes.PMID 12466546Read ↗

A practical guide for the functional annotation of genetic variations using SNPnexus.Semantic proximity Read ↗

iHAP--integrated haplotype analysis pipeline for characterizing the haplotype structure of genes.Semantic proximity Read ↗

HapCUT2: A Method for Phasing Genomes Using Experimental Sequence Data.Semantic proximity Read ↗

WHAP: haplotype-based association analysis.Semantic proximity Read ↗

Functional analysis of HapMap SNPs.Semantic proximity Read ↗

geneHapR: an R package for gene haplotypic statistics and visualization.Semantic proximity Read ↗

Definition and clinical importance of haplotypes.Semantic proximity Read ↗

A novel method for haplotype clustering and visualization.Semantic proximity Read ↗

GHap: an R package for genome-wide haplotyping.Semantic proximity Read ↗

Expanding TheCellMap.org to visualize a genome-scale genetic interaction network for a human cell lineSemantic proximity Read ↗

HaploBuild: an algorithm to construct non-contiguous associated haplotypes in family based genetic studies.Semantic proximity Read ↗

HAPLOT: a graphical comparison of haplotype blocks, tagSNP sets and SNP variation for multiple populations.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.